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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909185.1_cds_XP_016459410.1_52940
CDS Infomation

[gene=LOC107782969] [db_xref=GeneID:107782969] [protein=probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1] [protein_id=XP_016459410.1] [location=join(48774..48978,49080..49216,50107..50202,50719..50838,53186..53275,53626..53811,53935..54090,54755..54904,55004..55105,55352..55461,55546..55664,55958..56049)] [gbkey=CDS]
Sequence

ATGAGCGGAGCTCTGAAAATGGCGACTGACTCTCAAGCATACTTAGAAGGTGACAAGGTT
AAAGAAACCAAGTCCTTAATCGCCGAACTCTGCCGTCATTTTTACAACCAGGGCTGGGTT
GGGGGCACCGGCGGCAGCATCACCATTAAAGTCCACGATGAATCTATTCCCAAAGCCCAA
CAACTTATCGTCATGTCCCCTTCCGGGGTGCAAAAGGAAAGGATGGTGGAAGAGGATATG
TATGTGATGTCATCAGATGGGTCTATTTTAACTGCGCCGGTGGCTAAACCTCCTCCCCAC
AAATTTCCCAAGTGTTCTGATTGTGCTCCTCTTTTTATGAAGGCATATGAGATGCGTAAT
GCTGGTGCCGTTATCCACAGTCATGGAATGGAATCCTGCCTTGTAACAATGCTTAATCCA
CTAGCAAAAGAATTTCGGATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGT
TACTATGACGAACTTGTGGTTCCTATCATAGAGAACACTGCATATGAGAGAGAACTCACA
GAATCTCTTACTGAAGCTATCAAAGCTTACCCAAAAGCAACAGCCGTGCTGGTCCGCAAC
CATGGTATATATGTGTGGGGAGATTCTTGGATCAGTGCTAAAACACAGGCTGAGTGCTAC
CACTACCTCTTTGATGCTGCTATTAAACTTCATCAATTAGGACTTGACTGGACAACACCA
GCTCATGGTCCCATTCATAACCCCAATGGTCCTTTTGTTGGCATCCAGAATGCCAAAATA
TCTGCAAAAGCAGGTACTCTTGCTTCAAATGGCAGCAGCATTGAACCATCAAGGCGGTGC
ATCATTTTGGATATAGAAGGAACCACTACCCCAATAACATTTGTTACTGATGTTCTGTTC
CCTTATGCACGTGATAATGTGGGGAGACATTTGGATGCTACATATGGCTCAGCAGAAACT
CAACAGGATATTAAGTTATTACGTGCTCAAGTGCAACAAGACCTAGAAAATGGTGTTGCT
GGTGCTGTGCATATCCCGTCTGAAGATGCTGGGAAGATGGAAGTACTTGCAGCTTTGGTT
GCTAATGTAGAGGCAATGATTAAAGCGGACCGAAAGATTATTGCATTGAAGGAGTTACAG
GGACATATATGGCAAACTGGGTTTGAGAATAATGAGTTAGAGGGACTTGTTTTTGATGAT
GTGCCTCAAGCTCTTGAGAAATGGACCTCTTTAGGCTTCAAGGTATACATATACTCAAGT
GGCAGCAGATTGGCACAGAGACTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAAT
TATCTCTGTGGATTTTTCGATACAACAGTGGGAAACAAGAGAGAAACAAAAAGTTACCAA
GAAATTACAGCATCGTTGGGAGTAGATAATCCATCAGAGATATTGTTTTTGACAGATGTC
TATCAAGAAGCAACAGCTGCAAAGGCAGCAGGTTTGGAAGTGATAATCTCTGTCAGACCA
GGAAACGGACCTCTCCCGGATAATCACGGGTTCAGGACAATCCGATCATTTTCAGAGATC
TGA

Peptide Sequence

PEP ID

XP_016459410.1
PEP Infomation

PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Nicotiana tabacum]
Sequence

MSGALKMATDSQAYLEGDKVKETKSLIAELCRHFYNQGWVGGTGGSITIKVHDESIPKAQ
QLIVMSPSGVQKERMVEEDMYVMSSDGSILTAPVAKPPPHKFPKCSDCAPLFMKAYEMRN
AGAVIHSHGMESCLVTMLNPLAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYERELT
ESLTEAIKAYPKATAVLVRNHGIYVWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWTTP
AHGPIHNPNGPFVGIQNAKISAKAGTLASNGSSIEPSRRCIILDIEGTTTPITFVTDVLF
PYARDNVGRHLDATYGSAETQQDIKLLRAQVQQDLENGVAGAVHIPSEDAGKMEVLAALV
ANVEAMIKADRKIIALKELQGHIWQTGFENNELEGLVFDDVPQALEKWTSLGFKVYIYSS
GSRLAQRLLFGHTKHGDLRNYLCGFFDTTVGNKRETKSYQEITASLGVDNPSEILFLTDV
YQEATAAKAAGLEVIISVRPGNGPLPDNHGFRTIRSFSEI

Transcript Sequence

Gene sequence data has not been registered.